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Genomic characterization of orthobunyavirus of veterinary importance in America

Tauro, Laura B.; Souza, William Marciel de; Rivarola, Maria Elisa; Oliveira, Rodrigo de; Konigheim, Brenda; Silva, Sandro Patroca da; Lima, Clayton; Oliveira, Layanna; Vasconcelos, Janaina M; Cardoso, Jedson Ferreira; Vianez Júnior, João Lídio da Silva Gonçalves; Nunes, Márcio Roberto Teixeira; Contigiani, Marta S (Elsevier, 2019)

During 2013, in Argentina, three new isolates of serogroup Bunyamwera virus (genus Orthobunyavirus, family Peribunyaviridae) were recovered from two horses with encephalitis, and from an aborted equine fetus. In the present ...

Characterization of Triniti virus supports its reclassification in the family Peribunyaviridae

Lima, Juliana Abreu; Nunes Neto, Joaquim Pinto; Castro, Karoline Silva; Rosa, Amélia Paes de Andrade Travassos da; Tesh, Robert; Nunes, Márcio Roberto Teixeira; Popov, Vsevolod Leonidovich; Vasilakis, Nikos; Guzman, Hilda; Widen, Steven; Silva, Sandro Patroca da; Medeiros, Daniele Barbosa de Almeida; Cardoso, Jedson Ferreira; Martins, Lívia Caricio; Azevedo, Raimunda do Socorro da Silva; Vasconcelos, Pedro Fernando da Costa; Chiang, Jannifer Oliveira (Microbiology Society, 2019)

Triniti virus (TNTV) has been isolated in Trinidad and Tobago and in Brazil. To date little is known about this virus, which is classified as an ungrouped virus within the family Togaviridae. Here, three isolates of TNTV ...

Diversity of metallo-β-lactamase-encoding genes found in distinct species of Acinetobacter isolated from the Brazilian Amazon Region

Brasiliense, Danielle Muruci; Cayô, Rodrigo; Streling, Ana Paula; Nodari, Carolina S; Barata, Rafael R; Lemos, Poliana S; Massafra, Janaina M; Correa, Yan; Magalhães, Igor; Gales, Ana C; Sodré, Roberta (Instituto Oswaldo Cruz, 2019)

BACKGROUND: The multidrug resistance (MDR) phenotype is frequently observed in Acinetobacter baumannii, the most clinically relevant pathogenic species of its genus; recently, other species belonging to the A. calcoaceticus-A. ...

Taxonomy of the order Bunyavirales: update 2019

Abudurexiti, Abulikemu; Adkins, Scott; Alioto, Daniela; Alkhovsky, Sergey V; Avsic-Zupanc, Tatjana; Ballinger, Matthew J; Bente, Dennis A; Beer, Martin; Bergeron, Éric; Blair, Carol D; Briese, Thomas; Buchmeier, Michael J; Burt, Felicity J; Calisher, Charles H; Cháng, Chénchén; Charrel, Rémi N; Choi, II Ryong; Clegg, J. Christopher S; Torre, Juan Carlos de la; Lamballerie, Xavier de; Dèng, Fei; Di Serio, Francesco; Digiaro, Michele; Drebot, Michael A; Duàn, Xiaoméi; Ebihara, Hideki; Elbeaino, Toufic; Ergunay, Koray; Fulhorst, Charles F; Garrison, Aura R; Gao, George Fú; Gonzalez, Jean-Paul J; Groschup, Martin H; Gunther, Stephan; Haenni, Anne-Lise; Hall, Roy A; Hepojoki, Jussi; Hewson, Roger; Hú, Zhìhóng; Hughes, Holly R; Jonson, Miranda Gilda; Junglen, Sandra; Klempa, Boris; Klingstrom, Jonas; Kòu, Chun; Laenen, Lies; Lambert, Amy J; Langevin, Stanley A; Liu, Dan; Lukashevich, Igor S; Luò, Tao; Lu, Chuánwèi; Maes, Piet; Souza, William Marciel de; Marklewitz, Marco; Martelli, Giovanni P; Matsuno, Keita; Mielke-Ehret, Nicole; Minutolo, Maria; Mirazimi, Ali; Moming, Abulimiti; Muhlbach, Hans-Peter; Naidu, Rayapati; Navarro, Beatriz; Nunes, Márcio Roberto Teixeira; Palacios, Gustavo; Papa, Anna; Pauvolid-Corrêa, Alex; Paweska, Janusz T; Qiáo, Jié; Radoshitzky, Sheli R; Resende, Renato O; Romanowski, Víctor; Sall, Amadou Alpha; Salvato, Maria S; Sasaya, Takahide; Shen, Shu; Shí, Xiaohóng; Shirako, Yukio; Simmonds, Peter; Sironi, Manuela; Song, Jin-Won; Spengler, Jessica R; Stenglein, Mark D; Su, Zhèngyuàn; Sun, Sùróng; Táng, Shuang; Turina, Massimo; Wáng, Bó; Wáng, Chéng; Wáng, Huálín; Wáng, Jun; Wéi, Táiyún; Whitfield, Anna E; Zerbini, F. Murilo; Zhang, Jìngyuàn; Zhang, Lei; Zhang, Yànfang; Zhang, Yong-Zhen; Zhang, Yújiang; Zhou, Xueping; Zhu, Lìying; Huhn, Jens H (Springer Verlag, 2019)

In February 2019, following the annual taxon ratifcation vote, the order Bunyavirales was amended by creation of two new families, four new subfamilies, 11 new genera and 77 new species, merging of two species, and ...

A novel hepacivirus in wild rodents from South America

Souza, William Marciel de; Fumagalli, Marcílio Jorge; Santos Jr, Gilberto Sabino; Maia, Felipe Gonçalves Motta; Modha, Sejal; Nunes, Márcio Roberto Teixeira; Murcia, Pablo Ramiro; Figueiredo, Luiz Tadeu Moraes (MDPI, 2019)

The Hepacivirus genus comprises single-stranded positive-sense RNA viruses within the family Flaviviridae. Several hepaciviruses have been identified in different mammals, including multiple rodent species in Africa, ...

Nearly complete genome sequences of enterovirus 96 and enterovirus 99 strains isolated in the northern region of Brazil

Machado, R. Scerni; Ferreira, J. Lima; Alves, J. C. Santos; Bandeira, R. Silva; Lemos, P. Silva; Franco Filho, L. Chaves; Cardoso, Jedson Ferreira; Vianez Júnior, João Lídio da Silva Gonçalves; Tavares Neto, Fernando (American Society for Microbiology, 2019)

In this study, we report the nearly complete genome sequences of one enterovirus 96 (EV-C96) isolate (strain 3499/BRA-PA/2010) and two enterovirus 99 (EV-C99) isolates (strains 3291/BRA-PA/2010 and 3944/BRA-PA/2011). The ...

Strengthening the interaction of the virology community with the international committee on taxonomy of viruses (ICTV) by linking virus names and their abbreviations to virus species

Calisher, Charles H; Briese, Thomas; Brister, J. Rodney; Charrel, Rémi N; Durrwald, Ralf; Ebihara, Hideki; Fulhorst, Charles F; Gão, George Fú; Groschup, Martin H; Haddow, Andrew D; Hyndman, Timothy H; Junglen, Sandra; Klempa, Boris; Klingstrom, Jonas; Kropinski, Andrew M; Krupovic, Mart; La Beaud, A. Desiree; Maes, Piet; Nowotny, Norbert; Nunes, Márcio Roberto Teixeira; Payne, Susan L; Radoshitzky, Sheli R; Rubbenstroth, Dennis; Sabanadzovic, Sead; Sasaya, Takahide; Stenglein, Mark D; Varsani, Arvind; Wahl, Victoria; Weaver, Scott C; Zerbini, Francisco Murilo; Vasilakis, Nikos; Huhn, Jens H (Oxford University Press, 2019)

The International Committee on Taxonomy of Viruses (ICTV) is tasked with classifying viruses into taxa (phyla to species) and devising taxon names. Virus names and virus name abbreviations are currently not within the ...

Transcriptomic analysis of Mucor irregularis containing a negative single-stranded RNA mycovirus

Barata, Rafael R; Vianez Júnior, João Lídio da Silva Gonçalves; Nunes, Márcio Roberto Teixeira (American Society for Microbiology, 2019)

The fungus Mucor irregularis is a causative agent of mucormycosis. The transcriptome analysis of the isolated M. irregularis strain C3B revealed the presence of an RNA polymerase domain of a negative-polarity RNA virus. ...

Metagenomic analysis of samples from three bat species collected in the Amazon rain forest

Franco Filho, Luciano Chaves; Barata, Rafael Ribeiro; Cardoso, Jedson Ferreira; Massafra, Janaina Mota de Vasconcelos; Lemos, Poliana da Silva; Casseb, Livia Medeiros Neves; Cruz, Ana Cecília Ribeiro; Nunes, Marcio Roberto Teixeira (American Society for Microbiology, 2019)

We report here the sequencing of five microbiome samples collected from different bat species in the Amazon rain forest. All contigs matching virus sequences were assigned to members of the Retroviridae family, while the ...

A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes

Fonseca, Vagner; Libin, Pieter J. K; Theys, Kristof; Faria, Nuno R; Nunes, Márcio Roberto Teixeira; Restovic, Maria I; Freire, Murilo; Giovanetti, Marta; Cuypers, Lize; Nowé, Ann; Abecasis, Ana; Deforche, Koen; Santiago, Gilberto A; Siqueira, Isadora C. de; San, Emmanuel J; Machado, Kaliane C. B; Azevedo, Vasco; Bispo-de Filippis, Ana Maria; Cunha, Rivaldo Venâncio da; Pybus, Oliver G; Vandamme, Anne-Mieke; Alcântara, Luiz Carlos Junior; Oliveira, Tulio de (Public Library of Science, 2019)

In recent years, an increasing number of outbreaks of Dengue, Chikungunya and Zika viruses have been reported in Asia and the Americas. Monitoring virus genotype diversity is crucial to understand the emergence and spread ...